Cottage Cheese Protein Pasta Bake

Featured in: Easy Everyday Meals

This hearty pasta bake combines al dente penne with a rich ground beef and tomato sauce, layered with fluffy cottage cheese and topped with golden, bubbling mozzarella. Perfect for high-protein meal prep, this American-Italian inspired dish delivers 41g of protein per serving. The cottage cheese adds creaminess without excess calories, while the beef sauce simmers with oregano, basil, and a hint of red pepper. Bake until bubbly and golden for a satisfying dinner that feeds six.

Updated on Sun, 01 Feb 2026 09:44:00 GMT
Golden, bubbling Cottage Cheese Protein Pasta Bake with Ground Beef emerges from the oven, its crispy mozzarella topping speckled with fresh basil. Save to Pinterest
Golden, bubbling Cottage Cheese Protein Pasta Bake with Ground Beef emerges from the oven, its crispy mozzarella topping speckled with fresh basil. | nibbro.com

The smell hit me before I even opened the oven door: bubbling cheese, caramelized tomato, and that unmistakable scent of meat mingling with herbs. My sister had just asked if I had anything quick for dinner, and I realized I'd made way too much of this bake the night before. We sat on the counter eating straight from the dish, laughing about how something this simple could taste so indulgent. That's when I knew this wasn't just another pasta recipe.

I made this for a friend who was training for a marathon and swore off anything that wasn't loaded with protein. She took one bite, paused, and asked if I'd lied about the cottage cheese because she couldn't taste it at all. The mozzarella and Parmesan do all the talking on top, while the cottage cheese melts into the sauce, adding body and richness without any of that grainy texture people worry about. It became her weekly meal prep, and she still texts me photos of her version every few months.

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Ingredients

  • Penne or rigatoni: The ridges and hollow centers grab onto the sauce and cheese, making every bite satisfying instead of slippery.
  • Lean ground beef: Go for 85% lean so you get flavor without a pool of grease; drain it well after browning.
  • Low-fat cottage cheese: This is your secret protein weapon, melting into creamy pockets throughout the bake without announcing itself.
  • Parmesan cheese: The aged, salty funk adds depth to the sauce and keeps the dish from tasting one-note.
  • Part-skim mozzarella: Split it in half, some goes inside for creaminess, the rest on top for that golden, bubbly crust.
  • Yellow onion: Chop it fine so it melts into the sauce and adds sweetness without chunky bits.
  • Garlic: Mince it fresh and don't let it burn, just 30 seconds of sizzle releases all the fragrance you need.
  • Crushed tomatoes: They give you a thick, hearty base that clings to the pasta instead of pooling at the bottom.
  • Tomato paste: Stir it in with the beef to caramelize slightly, it deepens the tomato flavor and thickens everything up.
  • Beef broth or water: Just enough liquid to loosen the sauce so it coats the pasta without drying out in the oven.
  • Olive oil: A tablespoon to start the aromatics, nothing fancy needed here.
  • Dried oregano and basil: Classic Italian backbone, they smell like comfort and tie everything together.
  • Red pepper flakes: Optional, but a pinch adds a gentle warmth that balances the richness.
  • Salt and black pepper: Taste as you go, the cheeses add salt so go light at first.
  • Fresh parsley or basil: A handful of green at the end makes it look alive and adds a bright, grassy note.

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Instructions

Prep your oven and dish:
Set the oven to 375°F and grease your 9x13 baking dish lightly so nothing sticks to the corners. This step takes ten seconds but saves you from scrubbing later.
Boil the pasta just shy of done:
Cook it one to two minutes less than the package says, it'll finish in the oven and you don't want mush. Drain it well and set it aside while you build the sauce.
Sauté the aromatics:
Heat olive oil over medium, toss in the onion, and let it soften and turn translucent, about three to four minutes. Add the garlic and stir for just 30 seconds until your kitchen smells incredible.
Brown the beef:
Break the ground beef into small crumbles as it cooks, letting it brown evenly for six to eight minutes. If there's a lot of fat, drain some off so the sauce doesn't get greasy.
Build the tomato sauce:
Stir in the tomato paste first to coat the beef and let it cook for a minute, then pour in crushed tomatoes and broth. Season with oregano, basil, red pepper flakes, salt, and pepper, then simmer on low for eight to ten minutes, stirring now and then.
Combine everything in a big bowl:
Toss the drained pasta with the beef sauce, cottage cheese, Parmesan, and half the mozzarella until it's all coated and creamy. It should look almost too saucy, the oven will tighten it up.
Spread and top:
Pour the mixture into your greased dish, spreading it out evenly. Sprinkle the remaining mozzarella over the top so every corner gets some golden cheese.
Bake until bubbly and golden:
Slide it into the oven for 20 to 25 minutes, watching for the cheese to melt, bubble, and brown at the edges. The smell will tell you when it's ready.
Rest and garnish:
Let it sit for five minutes so the sauce settles and you don't burn your mouth. Scatter fresh parsley or basil on top before serving.
Steam rises from a hearty serving of Cottage Cheese Protein Pasta Bake with Ground Beef, revealing creamy curds and rich, meaty tomato sauce. Save to Pinterest
Steam rises from a hearty serving of Cottage Cheese Protein Pasta Bake with Ground Beef, revealing creamy curds and rich, meaty tomato sauce. | nibbro.com

One Sunday, I brought this to a potluck and watched three people go back for seconds before anyone touched the salad. A guy who claimed he hated cottage cheese asked for the recipe, and I didn't have the heart to tell him until after he'd finished his third serving. That's the magic of this bake: it hides the healthy stuff under layers of cheese and comfort, and no one's the wiser.

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Make It Your Own

Swap the ground beef for turkey or chicken if you want it leaner, or toss in two cups of fresh spinach or diced bell peppers when you mix everything together. I've added both before and it turns the bake into something that feels a little more virtuous without losing any of the richness. If you're gluten-free, just use your favorite gluten-free pasta and follow the same steps.

Storing and Reheating

This keeps beautifully in an airtight container in the fridge for up to three days, and honestly, it tastes even better the next day after the flavors have had time to settle. Reheat individual portions covered in the microwave or the whole dish in a low oven with foil on top so it doesn't dry out. I've even frozen single servings before, and they thaw and reheat like a dream.

What You'll Need to Get Started

Keep a large pot for the pasta, a big skillet for the sauce, a mixing bowl to toss everything together, and a 9x13 baking dish for the oven. A wooden spoon or spatula helps you break up the beef and stir the sauce without scratching your pans. Don't forget a colander to drain the pasta, and you're all set.

  • Use a deep skillet so the sauce doesn't splatter everywhere when you're simmering it.
  • A silicone spatula makes scraping every bit of cheesy goodness out of the bowl much easier.
  • If you're doubling the recipe, grab a second baking dish or a deep casserole with high sides.
Fork-ready Cottage Cheese Protein Pasta Bake with Ground Beef sits in a ceramic dish, garnished with parsley and paired with a crisp side salad. Save to Pinterest
Fork-ready Cottage Cheese Protein Pasta Bake with Ground Beef sits in a ceramic dish, garnished with parsley and paired with a crisp side salad. | nibbro.com

This bake has become my go-to for nights when I want something hearty without spending an hour in the kitchen. It's the kind of dish that makes people feel cared for, and that's worth every minute.

Recipe FAQs

Can I use a different type of pasta?

Yes, any short pasta shape works well. Try rigatoni, ziti, rotini, or penne. Cook until just al dente for best texture after baking.

How do I make this dish lighter?

Substitute ground turkey or chicken for beef, use whole wheat pasta, and increase vegetables like spinach or bell peppers for added nutrients with fewer calories.

Can I prepare this ahead of time?

Absolutely. Assemble the entire dish, cover tightly, and refrigerate up to 24 hours. Bake directly from the fridge, adding 5-10 minutes to the cooking time.

Why use cottage cheese in this bake?

Cottage cheese adds creaminess and boosts protein content without the heaviness of ricotta or cream cheese. It creates a lighter, fluffier texture while keeping the dish satisfying.

How should I store leftovers?

Store in an airtight container in the refrigerator for up to 3 days. Reheat individual portions covered in the microwave or warm the entire dish covered in a 350°F oven.

Can I freeze this pasta bake?

Yes, freeze before or after baking. Wrap tightly in foil and freeze up to 3 months. Thaw overnight in the refrigerator before reheating or baking.

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Cottage Cheese Protein Pasta Bake

Tender pasta with tomato-beef sauce, cottage cheese, and melted mozzarella in a hearty, creamy bake.

Prep Time
20 minutes
Cook Time
45 minutes
Total Duration
65 minutes
Created by Evan Brooks


Skill Level Medium

Cuisine American-Italian

Makes 6 Portions

Diet Preferences None specified

What You'll Need

Pasta

01 12 ounces penne or rigatoni pasta

Meat and Dairy

01 1 pound lean ground beef, 85% lean or higher
02 1 cup low-fat cottage cheese
03 1/2 cup grated Parmesan cheese
04 1 cup shredded part-skim mozzarella cheese, divided

Vegetables and Aromatics

01 1 medium yellow onion, finely chopped
02 2 cloves garlic, minced

Sauce

01 1 can (14 ounces) crushed tomatoes
02 1 can (6 ounces) tomato paste
03 1/2 cup beef broth or water

Pantry and Spices

01 1 tablespoon olive oil
02 1 teaspoon dried oregano
03 1 teaspoon dried basil
04 1/2 teaspoon red pepper flakes, optional
05 Salt and freshly ground black pepper to taste

Garnish

01 Fresh parsley or basil leaves

How-To Steps

Step 01

Prepare Baking Dish and Preheat Oven: Preheat oven to 375°F. Lightly grease a 9x13-inch baking dish with cooking spray or oil.

Step 02

Cook Pasta: Bring a large pot of salted water to a boil. Cook pasta until just al dente, about 1-2 minutes less than package directions. Drain and set aside.

Step 03

Sauté Aromatics: Heat olive oil in a large skillet over medium heat. Add onion and sauté until translucent, 3-4 minutes. Stir in garlic and cook for 30 seconds until fragrant.

Step 04

Brown Ground Beef: Add ground beef, breaking it into small pieces. Cook until browned and no longer pink, 6-8 minutes. Drain excess fat if desired.

Step 05

Build Sauce: Stir in tomato paste to coat the beef. Add crushed tomatoes and beef broth. Mix in oregano, basil, red pepper flakes if using, salt, and pepper. Simmer on low for 8-10 minutes, stirring occasionally.

Step 06

Combine Pasta and Sauce: In a large bowl, combine drained pasta, beef-tomato sauce, cottage cheese, Parmesan, and half of the mozzarella. Toss gently until evenly mixed.

Step 07

Assemble Bake: Spread the mixture into the prepared baking dish. Sprinkle the remaining mozzarella over the top.

Step 08

Bake: Bake for 20-25 minutes, or until the cheese is melted, bubbly, and golden at the edges.

Step 09

Rest and Finish: Remove from oven and let rest for 5 minutes. Garnish with chopped parsley or basil before serving.

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Tools You'll Need

  • Large pot
  • Large skillet
  • Mixing bowl
  • 9x13-inch baking dish
  • Wooden spoon or spatula
  • Colander

Allergy Info

For allergen concerns, review each food item and check with your healthcare provider.
  • Contains wheat from pasta
  • Contains milk from cottage cheese, Parmesan, and mozzarella
  • May contain soy; check cheese and pasta labels
  • Always check ingredient labels for hidden allergens

Nutrition Details (per portion)

Nutritional values are for reference and aren't a substitute for professional health guidance.
  • Kcal: 575
  • Fats: 20 g
  • Carbohydrates: 56 g
  • Proteins: 41 g

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